BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030G12LP1|AL429288
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig979 1873 0.0
>3x_Contig979
Length = 3913
Score = 1873 bits (944), Expect = 0.0
Identities = 958/962 (99%), Gaps = 1/962 (0%)
Strand = Plus / Minus
Query: 1 gatctaaatcccagcaattgatgaaactaatatatgaaactgtatcaaatagccagcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 gatctaaatcccagcaattgatgaaactaatatatgaaactgtatcaaatagccagcggt 2965
Query: 61 gttgtatctctttgcataattcattgacatcattgatatcactgacgttaattcctaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 gttgtatctctttgcataattcattgacatcattgatatcactgacgttaattcctaacc 2905
Query: 121 tcaaatcttgttgtgcaatactcaaaagatggcaatactcgttaatggtataactcacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 tcaaatcttgttgtgcaatactcaaaagatggcaatactcgttaatggtataactcacct 2845
Query: 181 gtagaaactgctcatctgtagtgaatattcctatttcaagctcacctgacactacgatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2844 gtagaaactgctcatctgtagtgaatattcctatttcaagctcacctgacactacgatcc 2785
Query: 241 attggacactaaaccattgttcctcatattgtaaacaaacccgcagtcgatcagtaagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2784 attggacactaaaccattgttcctcatattgtaaacaaacccgcagtcgatcagtaagta 2725
Query: 301 ttatgtcatgtcgaagcaaatcgaagtctcggcaccaattgggaatgaaatttggtatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2724 ttatgtcatgtcgaagcaaatcgaagtctcggcaccaattgggaatgaaatttggtatat 2665
Query: 361 agtcatatacaccaatatgtttagagtacttatccaccagagattgattgaactccctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 agtcatatacaccaatatgtttagagtacttatccaccagagattgattgaactccctta 2605
Query: 421 tattaggataggcaataagctcatcgttaaagatatctgatttagcaggtggtcttacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 tattaggataggcaataagctcatcgttaaagatatctgatttagcaggtggtcttacat 2545
Query: 481 tttgcacaacgtcgcccaaaaagaagtaaacagtataccgtatatcgattggtaaactga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544 tttgcacaacgtcgcccaaaaagaagtaaacagtataccgtatatcgattggtaaactga 2485
Query: 541 ggaacagcttggtatcaaacattccatctcatgtgccccgattgacctgtgatcgtgaat 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2484 ggaacagcttggtatcaaacattccatctcatgtgccctgattgacctgtgatcgtgaat 2425
Query: 601 cttttgcagctcatttctctttattcttcttcatgggaaacttcaataatttacgcgttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 cttttgcagctcatttctctttattcttcttcatgggaaacttcaataatttacgcgttt 2365
Query: 661 taatttcgttctttgcctttattctaacgacctttatgaatggaataaaagagacagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 taatttcgttctttgcctttattctaacgacctttatgaatggaataaaagagacagata 2305
Query: 721 cagtaaatgcaccgttgttactcgtgatatcaagcgctagtatggatgctcttaagattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 cagtaaatgcaccgttgttactcgtgatatcaagcgctagtatggatgctcttaagattg 2245
Query: 781 agatcaagctgtgggagcgtgctttcgagaaagagcatggaaggcttcctgagaaagatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 agatcaagctgtgggagcgtgctttcgagaaagagcatggaaggcttcctgagaaagatg 2185
Query: 841 atataaaaaaggataaagaggtcaagagaaagtataaacagtatgcacagctcaagaagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 atataaaaaaggataaagaggtcaagagaaagtataaacagtatgcacagctcaagaagg 2125
Query: 901 atgctactgttaaaccatcggtgggaggttaacgtagagcaaacaccagttaagtcgcmt 960
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
Sbjct: 2124 atgctactgttaaaccatcggt-ggaggttaacgtagagcaaacaccagtgaagtcgcat 2066
Query: 961 gt 962
||
Sbjct: 2065 gt 2064
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7163
Number of Sequences: 1807
Number of extensions: 7163
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)